#PlantGenomics is an active hashtag on Bluesky. In the last 30 days, 5 people shared 23 posts with it — around 1 a day. Activity is down 73% versus the previous week, peaking on Sep 7 with 3 posts.

Posts with #PlantGenomics

UCDavisPlants

@ucdavisplants.bsky.social

almost 2 years ago

🌱 Daniel Kliebenstein contributed to an article on how structural variants reshape gene expression and traits in Brassica napus, offering insights for evolution, breeding, and genome editing. ▶️ www.nature.com/articles/s41... #PlantGenomics #PlantBreeding

www.nature.com

Structural variation reshapes population gene expression and trait variation in 2,105 Brassica napus accessions - Nature Genetics

Multiomics joint analyses based on a structural variant (SV) map from 16 genome assemblies and 2,105 resequenced accession genomes shed light on the regulatory effect of SVs on gene expression and tra...

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Boas Pucker

@bpucker.bsky.social

over 1 year ago

I am trying to find everyone working on plant genomics: go.bsky.app/NqARJ7V Please let me know who is already on @bsky.app, but missing in this #PlantGenomics starter pack

Everything around plant genomics, sequencing technologies, and latest tools

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Marc Somssich

@somssich.bsky.social

almost 2 years ago

📜 Identification of plant transcriptional activation domains 🧑‍🔬 Nicholas Morffy, @luciastrader.bsky.social, et al. 📔 @natureportfolio.bsky.social 🔗 www.nature.com/articles/s41... #️⃣ #PlantScience #PlantGenomics #PlantBioInformatics #PlantMethods #PlantTools #PlantGenetics

www.nature.com

Identification of plant transcriptional activation domains - Nature

A high-throughput yeast-based assay is used to identify more than 1,500 activation domains (ADs) in Arabidopsis transcription factors, and a deep learning approach applied to this dataset can predict ...

0 11 27

Prof Ros Gleadow FAA 💙🕯️💚

@rgleadow.bsky.social

about 1 year ago

ONE Lectureship in genomics + TWO in ecology are advertised right now in my 'hood. Applications close 7th August. It'd be brilliant to have these filled with plant people. #PlantSciJobs #MonashBiol #plantecology #plantgenomics 🪴🧪🌱🌿🌾 This links to both : www.ecolsoc.org.au/opport….

www.ecolsoc.org.au

Three positions at Monash University (Melbourne, Australia): Lecturer/Senior Lecturer in Ecology (2 positions) or Genomics (1 position) - VIC - Ecological Society of Australia

Closing 7 August 2025 The School of Biological Sciences at Monash University is seeking three academics to join our team as a Lecturer or Senior Lecturer (tenured-equivalent position under the Austral...

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Marc Somssich

@somssich.bsky.social

over 1 year ago

📜 CRISPR–Cas applications in agriculture and plant research 🧑‍🔬 Aytug Tuncel, Changtian Pan, Yiping Qi, et al. 📔 @natrevmcb.bsky.social 🔗 www.nature.com/articles/s41... #️⃣ #PlantScience #PlantNGTs #PlantCRISPR #Agriculture #PlantGenomics #PlantGenomeEditing

www.nature.com

CRISPR–Cas applications in agriculture and plant research - Nature Reviews Molecular Cell Biology

CRISPR–Cas-mediated genome, epigenome and transcriptome engineering in crops is crucial as the human population grows and climate deteriorates. This Review discusses new CRISPR–Cas tools for precise e...

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Boas Pucker

@bpucker.bsky.social

7 days ago

Julie just completed sequencing run 200 on our PromethION @puckerlab.bsky.social . Time to celebrate numerous successful plant genomics projects and to look for new challenges! www.izmb.uni-bonn.de/en/pbb/news#... #PlantGenomics #Bioinformatics #LongReads

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Kuba Sawicki

@kubasawicki.bsky.social

10 months ago

Our paper “Giant chromosomes of a tiny plant” is out in @gigascience.bsky.social! We present a T2T genome assembly of the simple thalloid liverwort Apopellia endiviifolia with truly giant chromosomes. 🌱🧬 #plantgenomics #T2T #liverworts @nanoporetech.com Thanks @ncn.gov.pl ! tinyurl.com/m8tkkxd3

tinyurl.com

Giant chromosomes of a tiny plant - the complete telomere-to-telomere genome assembly of the simple thalloid liverwort Apopellia endiviifolia (Jungermanniopsida, Marchantiophyta)

AbstractBackground. The liverwort A. endiviifolia, a dioicous, simple thalloid species, is notable for its cryptic diversity, habitat adaptability, genomic

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Boas Pucker

@bpucker.bsky.social

7 months ago

🌿 New preprint: Genome sequence of Begonia manicata and genes responsible for striking red color of its leaf/stem outgrowths. Pigmentation appears linked to anthocyanin biosynthesis genes that are strongly expressed in the red tissues 📄 doi.org/10.64898/202... #PlantGenomics @puckerlab.bsky.social

Begonia manicata plant with red, soft outgrowths emerging from the leaf and stems. Photo credit: Jakob Maximilian Horz. Source: https://doi.org/10.64898/2026.02.26.708300

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Boas Pucker

@bpucker.bsky.social

10 months ago

Getting ready for our #PlantGenomics courses! 🌱🔬 The course is almost full, so check out the details soon if you want to join and learn about the power of long-read sequencing and cloud-based data analysis. Feel free to spread the word! 👉 www.izmb.uni-bonn.de/en/pbb/news#... @puckerlab.bsky.social

Screenshot of the de.NBI project for our upcoming courses. Details: https://www.izmb.uni-bonn.de/en/pbb/news#denbi2025

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Jose V. Die

@jdieramon.bsky.social

1 day ago

4/8 The genetic architecture was complex. We identified flowering-time-associated SNPs across several chromosomes and highlighted candidate genes. Variations in MOS14 and Apyrase 2 explained >86% of phenotypic variance in one population; HisIE accounted for >70% in another. #PlantGenomics

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Axel Visel

@axelvisel.bsky.social

about 1 year ago

Postdoc opportunity with @tomasbruna.bsky.social here at @jgi.doe.gov @berkeleylab.lbl.gov: Develop, benchmark, and apply Plant Genomic Language Models (gLMs) 🌿🧬💻 jobs.lbl.gov/jobs/computa... #AI #PlantGenomics #gLMs #Postdoc

Graphic announcing a Computational Postdoctoral Fellow position. Text: Computational Postdoctoral Fellow – Plant Genomic Language Models (gLMs). JGI is seeking a Computational Postdoctoral Fellow to join a funded project at Berkeley Lab’s Joint Genome Institute applying genomic language models (gLMs) to unlock new biological insights in plants. Join one of the world’s leading genomics facilities to pioneer AI applications in plant biology, with access to cutting-edge computational resources and diverse genomic datasets. This project will focus on developing and exploring applications of gLMs to plant genomes, from identifying novel regulatory elements to revealing evolutionary patterns across species, with particular interest in cross-species and data-limited scenarios. In this role, you will design tasks and datasets to test and extend gLM capabilities, apply models to generate new biological hypotheses, and share findings through high-impact publications and presentations.

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Marc Somssich

@somssich.bsky.social

over 1 year ago

📜 The future of genome editing in plants 🧑‍🔬 Larry Gilbertson, Holger Puchta, R. Keith Slotkin 📔 @natplants.nature.com 🔗 www.nature.com/articles/s41... #️⃣ #PlantScience #PlantCRISPR #PlantGE #PlantGenomics #PlantNGTs #GenomeEditing #PlantGenomeEditing

www.nature.com

The future of genome editing in plants - Nature Plants

Future genome editing in plants will mimic the natural evolutionary processes that shape genomes. It will be used to reshape plant genomes in a manner that could have happened naturally, but more prec...

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